BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B06LP1|AL428496
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1787 1701 0.0
>3x_Contig1787
Length = 34189
Score = 1701 bits (855), Expect = 0.0
Identities = 888/898 (98%), Gaps = 3/898 (0%)
Strand = Plus / Minus
Query: 1 attccttcctggttggactagtactgttataatggattgactcaactcaattggttggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23917 attccttcctggttggactagtactgttataatggattgactcaactcaattggttggat 23858
Query: 61 ttggcctttcttacctattctcttcatttggactatgggttactagattgaatggtggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23857 ttggcctttcttacctattctcttcatttggactatgggttactagattgaatggtggca 23798
Query: 121 aaagcattcggaatctactaaatagaaagggagatcattacgcacgattttgaaattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23797 aaagcattcggaatctactaaatagaaagggagatcattacgcacgattttgaaattttc 23738
Query: 181 aggaataaagcttttcaatataagatggagtattgactaacctaagcatcacgtaggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23737 aggaataaagcttttcaatataagatggagtattgactaacctaagcatcacgtaggatg 23678
Query: 241 atgacctgccacggtacagtttgaagatatatagtgggttctacgttttattgatgcgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23677 atgacctgccacggtacagtttgaagatatatagtgggttctacgttttattgatgcgtt 23618
Query: 301 gatctccagataagacagtttaatattcccagaatagtacagaacaatggattttcaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23617 gatctccagataagacagtttaatattcccagaatagtacagaacaatggattttcaagc 23558
Query: 361 ttttatattctgtggacgtgtgtgcgaa-staacaccgttttccaatgttcgtggagaca 419
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 23557 ttttatattctgtggacgtg-gtgcgaagctaacaccgttttccaatgttcgtggagaca 23499
Query: 420 ctggtgttcccaaagctctattgccggttgcyaaccgctccatgattgagttcgtactag 479
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 23498 ctggtgttcccaaagctctattgccggttgcaaaccgctccatgattgagttcgtactag 23439
Query: 480 attggtgtgagcaagcccaatttwaagaggtcaatctagttattgacgcatccgatgctg 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 23438 attggtgtgagcaagcccaatttaaagaggtcaatctagttattgacgcatccgatgctg 23379
Query: 540 acgaattagaggaaagtttgawaaaataccgtgaagtgagagggcattattttkgactgt 599
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 23378 acgaattagaggaaagtttgaaaaaataccgtgaagtgagagggcattattttggactgt 23319
Query: 600 tatcccaaagcgttggatcgaaccatgctcactatttgaaaaaaccatctcctattaata 659
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 23318 tatcccaaagcgttggatcgaaccatgctcactatttg-aaaaaccatctnctattaata 23260
Query: 660 ttataccctcaaaatgtgagaatacaggagaatgtctgaagaatgaattgctagataaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23259 ttataccctcaaaatgtgagaatacaggagaatgtctgaagaatgaattgctagataaga 23200
Query: 720 taactggagatttcgtgttgttaccttgtgatttcatcacagacattccaccacaggtgt 779
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 23199 taactggagatttcgtgttgttaccttttgatttcatcacagacattccaccacaggtgt 23140
Query: 780 ttttagatcagtatttgaataaagatccggagaatctagctatggcagtatattatcaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23139 ttttagatcagtatttgaataaagatccggagaatctagctatggcagtatattatcaca 23080
Query: 840 atgggtttgagaatatcgataagaagcatttaaagcaattcctgactgtatactccga 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23079 atgggtttgagaatatcgataagaagcatttaaagcaattcctgactgtatactccga 23022
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5926
Number of Sequences: 1807
Number of extensions: 5926
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)